Catalogue


11th Annunal International Conference, RECOMB 2007, Oakland, CA, USA, April 21-25, 2007 : proceedings [electronic resource] /
Terry Speed, Haiyan Huang (eds.).
imprint
Berlin ; New York : Springer, 2007.
description
xvi, 550 p. : ill.
ISBN
3540716807 (pbk. : alk. paper), 9783540716808 (pbk. : alk. paper)
format(s)
Book
A Look Inside
Summaries
Main Description
This book constitutes the refereed proceedings of the 11th Annual International Conference on Research in Computational Molecular Biology, RECOMB 2007, held in Oakland, CA, USA in April 2007. The 37 revised full papers presented were carefully reviewed and selected from just under 170 submissions. As the top conference in computational molecular biology, RECOMB addresses all current issues in algorithmic, theoretical, and experimental bioinformatics.
Main Description
This book constitutes the refereed proceedings of the 11th Annual International Conference on Research in Computational Molecular Biology, RECOMB 2007, held in Oakland, CA, USA in April 2007.The 37 revised full papers presented were carefully reviewed and selected from just under 170 submissions. As the top conference in computational molecular biology, RECOMB addresses all current issues in algorithmic, theoretical, and experimental bioinformatics.
Table of Contents
QNet : a tool for querying protein interaction networksp. 1
Pairwise global alignment of protein interaction networks by matching neighborhood topologyp. 16
Reconstructing the topology of protein complexesp. 32
Network legos : building blocks of cellular wiring diagramsp. 47
An efficient method for dynamic analysis of gene regulatory networks and in silico gene perturbation experimentsp. 62
A feature-based approach to modeling protein-DNA interactionsp. 77
Network motif discovery using subgraph enumeration and symmetry-breakingp. 92
Nucleosome occupancy information improves de novo motif discoveryp. 107
Framework for identifying common aberrations in DNA copy number datap. 122
Estimating genome-wide copy number using allele specific mixture modelsp. 137
GIMscan : a new statistical method for analyzing whole-genome array CGH datap. 151
Production-passage-time approximation : a new approximation method to accelerate the simulation process of enzymatic reactionsp. 166
Shift-invariant adaptive double threading : learning MHC II - peptide bindingp. 181
Reconstructing the phylogeny of mobile elementsp. 196
Beyond galled trees - decomposition and computation of galled networksp. 211
Variational upper bounds for probabilistic phylogenetic modelsp. 226
Heuristics for the gene-duplication problem : a [Theta](n) speed-up for the local searchp. 238
Support vector training of protein alignment modelsp. 253
Tools for simulating and analyzing RNA folding kineticsp. 268
Multiple sequence alignment based on profile alignment of intermediate sequencesp. 283
Connectedness profiles in protein networks for the analysis of gene expression datap. 296
Multivariate segmentation in the analysis of transcription tiling array datap. 311
A Bayesian model that links microarray mRNA measurements to mass spectrometry protein measurementsp. 325
Rearrangements in genomes with centromeres part I : translocationsp. 339
Identification of deletion polymorphisms from haplotypesp. 354
Free energy estimates of all-atom protein structures using generalized belief propagationp. 366
Minimizing and learning energy functions for side-chain predictionp. 381
Protein conformational flexibility analysis with noisy datap. 396
Deterministic pharmacophore detection via multiple flexible alignment of drug-like moleculesp. 412
Design of compact, universal DNA microarrays for protein binding microarray experimentsp. 430
Improved ranking functions for protein and modification-site identificationsp. 444
Peptide retention time prediction yields improved tandem mass spectrum identification for diverse chromatography conditionsp. 459
A fast and accurate algorithm for the quantification of peptides from mass spectrometry datap. 473
Association mapping of complex diseases with ancestral recombination graphs : models and efficient algorithmsp. 488
An efficient and accurate graph-based approach to detect population substructurep. 503
RB-finder : an improved distance-based sliding window method to detect recombination breakpointsp. 518
Comparative analysis of spatial patterns of gene expression in Drosophila melanogaster imaginal discsp. 533
Table of Contents provided by Blackwell. All Rights Reserved.

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